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Forum: Biostatistics

Epidemiology and biostatistics, public health research. GLM, logistic regression, survival analysis, clinical trials.

  1. Encorporating species' detection probability into a logistic regression

    Hello statistics peoples, I'm not sure if this is the right forum so please do point me in the right direction if not. I'm looking at using...

    Started by tiggerkate‎, 06-18-2011 10:49 AM
    • Replies: 0
    • Views: 673
    06-18-2011, 10:49 AM Go to last post
  2. Survival analysis for 2 different imaging modalities on same patient

    Dear Friends I am working on a project on pediatric cancer. The details are given below. 1. 34 patients underwent PET scan and CT scan at 2...

    Started by venkat‎, 06-11-2011 12:20 AM
    • Replies: 1
    • Views: 561
    06-17-2011, 03:23 PM Go to last post
  3. How do I apply the hazard ratios from an existing Cox model to a new dataset?

    Hello all, I have the hazard ratios (about 50) from an existing Cox model of survival based on national data, which calculates expected survival...

    Started by mkbehnke‎, 06-06-2011 09:22 AM
    • Replies: 1
    • Views: 926
    06-17-2011, 01:59 PM Go to last post
  4. Pointers for a 2x2 Discriminant Analysis? Can you do multiple DAs on the same MANOVA?

    Hi, I was wondering whether anyone could point me in the direction for help on performing a DA on a two-factor (2 IVs each with 2 groups) design....

    Started by J S‎, 06-08-2011 09:50 AM
    discriminant analysis, interaction term, manova, two-factor
    • Replies: 0
    • Views: 560
    06-08-2011, 09:50 AM Go to last post
  5. comparing multiple sequences of data over time

    Hi, would really appreciate help on how to test my data! I've three groups (with 5-8 individuals in each group; actually 5 in one and 8 in each of...

    Started by radia‎, 06-01-2011 02:45 PM
    • Replies: 4
    • Views: 3,060
    06-07-2011, 11:47 AM Go to last post
  6. crossover trial analysis

    I'm trying to analyze a crossover clinical trial with 2 treatment periods: study drug and placebo. I use SAS. I wasn't sure if I should use proc...

    Started by lovesas‎, 10-12-2010 07:34 AM
    • Replies: 2
    • Views: 2,405
    06-03-2011, 10:21 PM Go to last post
  7. effect vs. parameter significance

    In a logistic regression, I have a categorical variable (3 levels) which the type III analysis of effects shows as non-significant (p >.05). Yet in...

    Started by mostater‎, 06-03-2011 02:41 PM
    • Replies: 0
    • Views: 882
    06-03-2011, 02:41 PM Go to last post
  8. 2-way ANOVA on non-normal, hetergeneous data

    I'm trying to analyze growth data from chicks, and I need to perform the equivalent of a 2-way ANOVA (2x2 design, unequal sample sizes), but my data...

    Started by mogetons‎, 05-23-2011 06:59 PM
    • Replies: 7
    • Views: 7,048
    06-03-2011, 02:31 PM Go to last post
  9. sample representativeness

    Is there a statistical test to show that a sample is representative of a population? or is just fufilling some criteria, ie sample source, data...

    Started by alr621‎, 06-02-2011 10:11 AM
    clinical study, representative, sampling
    • Replies: 1
    • Views: 1,516
    06-02-2011, 10:55 AM Go to last post
  10. Chi sq? Or what else?

    I need to compare two recombination frequencies, and have previously used heterogeneity Chi Sq tests, but have recently been told that I cannot do...

    Started by janekerye‎, 05-25-2011 09:04 PM
    • Replies: 1
    • Views: 610
    06-02-2011, 08:06 AM Go to last post
  11. Exclamation Help with Factor analysis

    Hi, I am new with Factor Analysis, and need help to determint the cut off. For instance; I will measure the knowledge with 10 variable. How would I...

    Started by dinsya‎, 05-11-2011 02:29 AM
    • Replies: 4
    • Views: 1,150
    05-31-2011, 03:53 PM Go to last post
  12. How to do a one-way ANOVA on summary data

    I would like to compare eleven different means ± std. error using a one-way ANOVA with Tukey's multiple comparisons. This seems like a...

    Started by l3a9k‎, 05-25-2011 12:42 PM
    • Replies: 1
    • Views: 969
    05-25-2011, 01:17 PM Go to last post
  13. number of cycles and length of each cycle

    How is it possible to determine the number of estrous cycles in dogs when the occurrence of the cycle is given. For instance, when the...

    Started by saslover‎, 05-23-2011 05:50 PM
    • Replies: 2
    • Views: 864
    05-24-2011, 04:32 AM Go to last post
  14. Prevalence Ratio

    I recent stumbled upon a formula for Prevalence ratio which is (observed prevalence)/(Expected prevalence) with Observed prevalence is (Total...

    Started by Sandhya‎, 05-23-2011 11:14 AM
    • Replies: 0
    • Views: 1,393
    05-23-2011, 11:14 AM Go to last post
  15. Which test

    We have 4 groups of subjects. Each group is given a different drug. We measure expression of a protein at time zero and at 3 time-points. We want...

    Started by bears‎, 05-19-2011 05:49 PM
    • Replies: 3
    • Views: 687
    05-20-2011, 05:14 PM Go to last post
  16. GzLM for counts or ?

    Hi everyone, I'm trying to figure out how to run an appropriate comparison for clutch sizes of birds. Ultimately, I want to compare clutch size of...

    Started by mogetons‎, 05-14-2011 07:36 PM
    binomial, count data, glm, gzlm
    • Replies: 1
    • Views: 649
    05-20-2011, 04:08 PM Go to last post
  17. Odds Ratio and Hazard Ratio - HELP!

    I am trying to figure out how to calculate an estimated hazard ratio associated with a specific variable. I have the estimate and standard errors...

    Started by lca223‎, 05-19-2011 03:10 PM
    hazard ratios, help!, odds ratio
    • Replies: 4
    • Views: 3,893
    05-19-2011, 05:48 PM Go to last post
  18. MAPE has high values

    Have two data sets. One a set of calibrated estimations, another actual values. I am trying to calculate mean absolute percent error for the sets. ...

    Started by whewa‎, 05-19-2011 04:14 PM
    • Replies: 0
    • Views: 830
    05-19-2011, 04:14 PM Go to last post
  19. Confusion on what level should data follow normality

    Hi everyone. I'm experiencing some confusion as to what level the data should be normal. For instance, in an unpaired data set, where some...

    Started by joseph.skaf‎, 05-18-2011 10:06 AM
    normality, parametric, transformation
    • Replies: 2
    • Views: 735
    05-19-2011, 03:45 PM Go to last post
  20. Comparing means without knowing the raw data of one of the population. Possible?

    Hi I would like to compare some epidemiological findings in my study with similar findings in other studies. The problem is: 1. I don't know...

    Started by victorxstc‎, 05-17-2011 12:37 AM
    • Replies: 4
    • Views: 2,005
    05-17-2011, 11:36 AM Go to last post
  21. Randomized Study

    Suppose a pharmaceutical company wants to conduct a post-marketing clinical trial. It needs to recruit patients through retail pharmacies. Suppose...

    Started by aha123‎, 05-15-2011 03:45 AM
    • Replies: 2
    • Views: 528
    05-17-2011, 10:07 AM Go to last post
  22. Simplification of formula in logistic regression

    I have performed a logistic regression analysis including five variables and one outcome. However, I would like to simplify the formula significantly...

    Started by mikkelbrabrand‎, 05-15-2011 09:02 AM
    • Replies: 3
    • Views: 1,756
    05-17-2011, 10:05 AM Go to last post
  23. Is my study case-control or retrospective cohort?

    Hi AFAIK if we split the sample by the exposure, it is retrospective cohort; and if we split it by the disease, it is case control. I am...

    Started by victorxstc‎, 05-09-2011 11:20 AM
    case control, cohort, exposure, study design
    • Replies: 8
    • Views: 5,851
    05-13-2011, 11:18 AM Go to last post
  24. which multivariate proc to use- grouping populatons?

    Hi there, This is my first post to forum. Have big problem. I have data about concentration of three chemicals (three traits) in plants from 30...

    Started by stevanavramov‎, 05-11-2011 05:41 AM
    • Replies: 2
    • Views: 755
    05-13-2011, 04:44 AM Go to last post
  25. Smile How can data bellow the lower limit of detection be included in statistical analysis?

    My assay has a lower limit of detection of 10. How do I include data below this point in my analysis? Should I enter them as 10 or 0 or is it not...

    Started by onlineuser‎, 05-12-2011 12:14 AM
    biostatistics, lod, lower limit of detection, simple, statistics help
    • Replies: 1
    • Views: 1,582
    05-12-2011, 09:23 AM Go to last post
  26. Some help with repeated measusre + nested design ANOVA (maybe, I am not sure)

    Hi, there, This is my first post here, and I hope that I can get some help here. It is bit long, so please bear with me. I am currently doing...

    Started by northville‎, 05-11-2011 04:58 AM
    • Replies: 0
    • Views: 481
    05-11-2011, 04:58 AM Go to last post
  27. Lightbulb Proc surveylogistic

    Hi, 2 days ago I ask about logistics regression, and LINK gave me a good solution for it. It worked. But then after I compare the result between...

    Started by dinsya‎, 03-11-2011 06:09 AM
    • Replies: 6
    • Views: 2,626
    05-06-2011, 02:06 AM Go to last post
  28. Question TOTALLY Confused

    This paper suggests a measure of association (or correlation) between nominal data. It relies on the use of determinants. The general idea is that...

    Started by SandraM‎, 05-05-2011 09:17 AM
    • Replies: 0
    • Views: 540
    05-05-2011, 09:17 AM Go to last post
  29. Repeated measures or not?

    Hi All, I sampled crickets weekly over 5 weeks from the same population, and measured their body size. Half of the crickets were taken from...

    Started by Curseit‎, 05-04-2011 03:39 PM
    ecology, repeated measures
    • Replies: 0
    • Views: 458
    05-04-2011, 03:39 PM Go to last post
  30. Goodness of fit

    I have developed a risk scoring system that I'm trying to validate. It was originally developed in one cohort, and I am now validating it in a new,...

    Started by mikkelbrabrand‎, 05-03-2011 07:05 AM
    • Replies: 2
    • Views: 846
    05-04-2011, 06:18 AM Go to last post
  31. Poll Poll: Survival Analysis: Cox Proportional Hazards with 4000 indicator variables

    THE SITUATION: I am preparing a 420,008 observation Cox Proportional Hazards Regression model with 4001 indicator variables. The 4001st indicator...

    Started by kmatthews‎, 05-01-2011 09:03 AM
    cox, indicator, survival, valid?
    • Replies: 2
    • Views: 698
    05-02-2011, 12:36 AM Go to last post
  32. Calculating AUC using survival data

    Hi, first post. I am interested in calculating the areas under two survival curves (treatment group and control group) in an RCT; actually I am...

    Started by Iphix‎, 05-01-2011 09:16 AM
    • Replies: 0
    • Views: 869
    05-01-2011, 09:16 AM Go to last post
  33. Need help: Sample size using hypothesis

    Hello guys! I want to calculate the prevalence of transfusion transmitted viral infection (Here HIV, Hepatitis B and Hepatitis C will be tested) in...

    Started by ozzie77‎, 05-01-2011 01:57 AM
    • Replies: 0
    • Views: 464
    05-01-2011, 01:57 AM Go to last post
  34. Question standard errors of between-/within- subject factors

    Hi everyone :wave: I'm studying GEE at the moment and I don't understanding the passage below. Could if anyone kindly explain to me in...

    Started by kcwong5‎, 04-28-2011 09:50 AM
    • Replies: 0
    • Views: 473
    04-28-2011, 09:50 AM Go to last post
  35. Permanova design

    Hay , first Q on this forum.. ok so I need to perform a permanova analysis of some data 21 variables (7 species in triplicate) and 7 observations...

    Started by drimley‎, 04-27-2011 11:48 PM
    • Replies: 1
    • Views: 1,370
    04-28-2011, 12:40 AM Go to last post
  36. One-way ANOVA vs repeated measure ANOVA

    I am going to perform an RCT comparing a treatment to a control. The study has 3 time points, namely, pre-treatment, post-treatment, and 1-month...

    Started by jerryno34‎, 04-27-2011 10:12 PM
    • Replies: 1
    • Views: 2,388
    04-27-2011, 10:16 PM Go to last post
  37. Sample size calculation for clinical trial based on odds ratio

    Can anyone help get my head a bit clearer on this one? I have completed a cross-sectional study looking at the prevalence of adherence to a...

    Started by Hughesmd‎, 04-25-2011 05:24 PM
    • Replies: 0
    • Views: 1,908
    04-25-2011, 05:24 PM Go to last post
  38. Transforming z to t values (GLM, different error distributions)

    Hi, I am comparing behavioural data collected at two populations. Generalised linear models were used with a behavioural trait as a response...

    Started by PloverLover‎, 04-21-2011 09:17 AM
    binomial, glm, z to t values
    • Replies: 0
    • Views: 865
    04-21-2011, 09:17 AM Go to last post
  39. Lightbulb I need help with the Stats

    Hi, I have data on Hiv and need help with calculating the CI. The information I have are: 1. Estimated number people are infected t.ex. 320 2....

    Started by dinsya‎, 04-21-2011 04:11 AM
    • Replies: 0
    • Views: 381
    04-21-2011, 04:11 AM Go to last post
  40. Help on which tests to apply to landscape ecology data

    I am looking for help on which stats to apply to my landscape ecology data. I am attempting to demonstrate that a connectivity index is able to...

    Started by Bevan‎, 04-20-2011 11:36 AM
    • Replies: 0
    • Views: 583
    04-20-2011, 11:36 AM Go to last post
  41. I have data, need help with the Stats!

    Hello, I collected data for an ecology project. There are two variables: body size and latitude. Hypothesis: As lat decreases, body size...

    Started by kaptnclutch‎, 04-16-2011 06:32 PM
    • Replies: 2
    • Views: 874
    04-18-2011, 01:34 AM Go to last post
  42. Effect Size Calculation (Cohen's D) on adjusted mean differences Options

    Hi there, I try to quantify the results from a test between a treatment and placebo group using Cohen's d evaluated as below; d=((μt-μp...

    Started by JG28‎, 04-13-2011 10:52 PM
    • Replies: 0
    • Views: 2,221
    04-13-2011, 10:52 PM Go to last post
  43. design of a vaccine study

    I am trying to design a vaccine study. The objective of the study is to determine if vaccine exposure contributes to an increased risk in developing...

    Started by chucsp‎, 04-13-2011 07:39 AM
    • Replies: 0
    • Views: 536
    04-13-2011, 07:39 AM Go to last post
  44. analysing summary stats

    I have a bimodal distribution in my data. I know that all parametric and non-parametric tests become unreliable with bimodal datasets, and that it...

    Started by mogetons‎, 04-12-2011 08:23 PM
    • Replies: 0
    • Views: 680
    04-12-2011, 08:23 PM Go to last post
  45. testing integer data with unequal variances

    Hi! My thesis dataset includes 2 variables (lay date and incubation period) that are integers, non-normal and have unequal variances. I'd like to...

    Started by mogetons‎, 04-11-2011 04:18 PM
    • Replies: 0
    • Views: 712
    04-11-2011, 04:18 PM Go to last post
  46. data analysis for retrospective cohort study

    Hi!! Im embarrassed to be asking v basic questions :o I proposed a study topic for my group assignment, looking at cancer rates between...

    Started by niledee‎, 04-08-2011 07:17 AM
    • Replies: 2
    • Views: 3,050
    04-09-2011, 06:13 AM Go to last post
  47. sample size calculation in cox regression

    Anyone can help me to firgure out the sample size calculation in cox regression? Are there any simple formula or calculators for it? Thanks

    Started by jerryno34‎, 03-24-2011 09:11 PM
    • Replies: 1
    • Views: 2,062
    04-08-2011, 01:05 PM Go to last post
  48. Unhappy Repeated measures for 4x crossover design

    I have a four period crossover study where subjects take one of four treatments A to D in four different periods, during each period there response...

    Started by sally_anderton‎, 03-31-2011 09:48 AM
    • Replies: 1
    • Views: 1,787
    04-08-2011, 01:03 PM Go to last post
  49. Chi Square results

    Hi all, any help here will be greatly appreciated.. I have a 2 x2 matrix i have compose from data collected Epibiont NIS on Basibiont NIS = 1...

    Started by shift_540‎, 04-04-2011 01:21 AM
    • Replies: 1
    • Views: 1,194
    04-08-2011, 12:56 PM Go to last post
  50. using a co-factor when comparing two groups?

    Hi, I would like to compare two groups, one treated, one control. Usually, I would simply use a t-test, assuming normal distribution and equal...

    Started by colombeli‎, 04-03-2011 12:18 PM
    anova, co-factor, t-test
    • Replies: 5
    • Views: 1,698
    04-03-2011, 01:41 PM Go to last post
  51. Chi-square?

    Hi I tested if individuals were positive for 3 different pathogens at 4 different point of times. For the analysis I used chi-square test. The...

    Started by hey‎, 03-24-2011 11:03 AM
    • Replies: 1
    • Views: 918
    04-02-2011, 02:12 PM Go to last post
  52. One big or two small samples?

    I am sampling for a microbe using a presence/absence detection method near the Poisson limit. Assuming that my method can detect 1 CFU no matter...

    Started by bmiksch‎, 03-23-2011 06:15 PM
    • Replies: 3
    • Views: 723
    04-02-2011, 01:54 PM Go to last post
  53. Non-parametric t-test

    Hi Everyone, I have a dataset made up of incubation periods for first-laid and second-laid eggs (nest is the sampling unit) that I want to compare...

    Started by mogetons‎, 04-01-2011 10:48 AM
    • Replies: 8
    • Views: 2,910
    04-01-2011, 02:58 PM Go to last post
  54. Interpretation of Relative risk and confidence interval?

    There were fewer primary events in patients assigned to warfarin than in those assigned to aspirin (24, 1·8% per year vs 48, 3·8% per year, RR 0·48,...

    Started by nana0709‎, 08-28-2010 06:16 PM
    • Replies: 8
    • Views: 15,397
    04-01-2011, 02:10 AM Go to last post
  55. Question Estimating Missing Data - help required!

    Hi Forum I am having trouble trying to find a way of estimating missing data from a project I have been working on and I hope that someone can...

    Started by Entomologist‎, 03-25-2011 08:25 PM
    missing data imputation
    • Replies: 0
    • Views: 789
    03-25-2011, 08:25 PM Go to last post
  56. life tables: terminology...

    Hello! I'm working on relative survival and so, I'm using life tables. My problem concerns the terminology linked to these tables. Could you help...

    Started by lilly74‎, 03-14-2011 11:28 AM
    • Replies: 9
    • Views: 2,628
    03-24-2011, 10:15 AM Go to last post
  57. Clinical trial analysis - have I got it right?

    Hello all, I would like to see what the pain of a patient is before and after an opperation. But my data is not fitting the assumptions of ANOVA....

    Started by MissyPausch‎, 03-23-2011 08:02 AM
    anova, transformation
    • Replies: 1
    • Views: 653
    03-24-2011, 06:01 AM Go to last post
  58. Comparison of rehosp. data with retrospective review

    I'm a social psychologist at a nonprofit organization for people with cerebral palsy and other disabilities. We're anticipating a two-year project...

    Started by krobey‎, 03-23-2011 08:07 AM
    • Replies: 2
    • Views: 846
    03-23-2011, 08:12 PM Go to last post
  59. Markov Chain Epidemics

    Hello everyone! I want to model a generalized SIR epidemic in a closed population using a discrete time markov chain. The susceptibles become...

    Started by CraigSager‎, 03-22-2011 07:02 AM
    markov epidemics discrete
    • Replies: 0
    • Views: 835
    03-22-2011, 07:02 AM Go to last post
  60. inter-rater agreement: uses of kappa, pearson's, and intraclass coefficients

    Hi everyone: I really appreciate all of the great posts on here! I'm trying to wrap my head around a couple of things. First of all, a bit of...

    Started by reevesfs‎, 03-22-2011 03:56 AM
    interrater agreement, intraclass, kappa, pearson's
    • Replies: 0
    • Views: 1,092
    03-22-2011, 03:56 AM Go to last post

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