1. S

    Parameter of dispersion to use

    Hello, I have a quick question, first here is an example: These are two paramaters, let's say genes A and B and their level of expression in 9 samples. A: 5 5 7 2 2 8 6 5 3 var= 4,44 B: 0 0 0 0 0 0 3 3 3 var= 2,25 Usually people in the field look for the highly variable genes...
  2. V

    Correlation between lines:Odd man out

    Dear Friends, I am analyzing the presence of cis element in 1K upstream of some up regulated genes. I have got the number of elements in the smaller bins (50 bases each) of 1K promoter. Now when I am plotting them, I found that at around -800 from 0 (i.e. TSS), there is a sharp increase in...