Dear Friends,
I am analyzing the presence of cis element in 1K upstream of some up regulated genes. I have got the number of elements in the smaller bins (50 bases each) of 1K promoter. Now when I am plotting them, I found that at around -800 from 0 (i.e. TSS), there is a sharp increase in the number of those cis element (See attached figure).
Now i want a statistical test to say this confidently that region around -800 to -700 harbor more of cis elements.
Prompt response will be highly appreciated.
Regards
Vinay
I am analyzing the presence of cis element in 1K upstream of some up regulated genes. I have got the number of elements in the smaller bins (50 bases each) of 1K promoter. Now when I am plotting them, I found that at around -800 from 0 (i.e. TSS), there is a sharp increase in the number of those cis element (See attached figure).
Now i want a statistical test to say this confidently that region around -800 to -700 harbor more of cis elements.
Prompt response will be highly appreciated.
Regards
Vinay